MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6005_ses-2_T1w.
  • Date and time: 2022-11-07, 19:45.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5935144361544916
cnr2.1827379209124813
efc0.6138249783675057
fber1120.4875346260387
fwhmavg4.257969999999999
fwhmx4.13337
fwhmy4.84816
fwhmz3.79238
icvscsf0.21192127991361429
icvsgm0.4155844155844156
icvswm0.37249430450197013
inumed1.7514898777008057
inurange0.7201616227626801
qi10.0
qi20.0033679504934093617
rpvecsf25.380800549505334
rpvegm13.330151396887679
rpvewm17.40233923282767
sizex176
sizey256
sizez256
snrcsf3.507671100627674
snrgm10.502603209857355
snrtotal11.87635591881851
snrwm21.6187934459705
snrdcsf32.666065108252695
snrdgm73.21474869135501
snrdtotal65.64889205997936
snrdwm91.06586238033036
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk3.6800409031089316
summarybgmad7.194093884382585
summarybgmean18.893244467537926
summarybgmedian17.7397470921278
summarybgn2452035.0
summarybgp058.295940551906824
summarybgp9533.392465114593506
summarybgstdv8.12143636446951
summarycsfk0.9337124609182457
summarycsfmad83.23489268382431
summarycsfmean384.564405688334
summarycsfmedian358.7081213481724
summarycsfn32515.0
summarycsfp05261.087336614728
summarycsfp95591.4275153335184
summarycsfstdv102.26232590648407
summarygmk0.12804611971949953
summarygmmad74.72574937971588
summarygmmean807.5449206193573
summarygmmedian803.9757733605802
summarygmn21345.0
summarygmp05686.632563918829
summarygmp95940.4883448071777
summarygmstdv76.5483494132653
summarywmk0.6850828716822455
summarywmmad41.61744634191216
summarywmmean1000.749722246108
summarywmmedian999.9999787285924
summarywmn221381.0
summarywmp05924.5017021335661
summarywmp951077.89833875373
summarywmstdv46.255944980256906
tpmoverlapcsf0.16253794729709625
tpmoverlapgm0.43851274251937866
tpmoverlapwm0.49891820549964905
wm2max0.7514948978746209
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime11:49:57.990000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0594313, 0.991247, 0.117887, 0.0610764, 0.114263, -0.991571]
ImageOrientationTextSag>Cor(3.8)>Tra(-3.1)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0312428
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber18
ShimSetting[2659, 5453, -7452, 134, -117, -915, 188, -219]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp248.824
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum1ec1be30c3835b8703738bff05ead876
softwaremriqc
version0.16.1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.